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Vol. 18 No. 3 (2024)
In press / En imprenta

Fruits section

Occurrence and molecular characterization of cucumber mosaic virus (CMV) in plantain orchards in Caldas and Risaralda departments of Colombia

https://doi.org/10.17584/rcch.2024v18i3.17841

Published 2024-09-01

  • Diana Milena Rodríguez-Mora
    • ,
  • Luz Natalia Martínez-Caballero
    • ,
  • Mónica Betancourt
    • ,
  • Isabel Moreno

Diana Milena Rodríguez-Mora
Corporación Colombiana de Investigación Agropecuaria – Agrosavia, Centro de Investigación Palmira, Palmira (Colombia)

Luz Natalia Martínez-Caballero
Corporación Colombiana de Investigación Agropecuaria – Agrosavia, Centro de Investigación Palmira, Palmira (Colombia)

Mónica Betancourt
Corporación Colombiana de Investigación Agropecuaria – Agrosavia, Centro de investigación Tibaitatá, Mosquera (Colombia)

Isabel Moreno
Corporación Colombiana de Investigación Agropecuaria – Agrosavia, Centro de Investigación Palmira, Palmira (Colombia)

Chlorotic streaking and mosaic in plantain leaf. Photo: M. Betancourt

Abstract

Cucumber mosaic virus (CMV) affects plantain (Musa AAB) orchards in most producing regions across the globe. This study aimed to determine the occurrence and characterize the CMV affecting plantain orchards in the departments of Caldas and Risaralda, Colombia. Leaf tissue samples were collected from six municipalities, then they were screened for CMV diagnosis using the enzyme-linked immunosorbent assay (ELISA). The samples with positive reaction were confirmed by reverse transcription polymerase chain reaction (RT-PCR). The results confirmed the presence of CMV with an incidence of 2.8% in the region in study. For the molecular characterization of the virus, a partial region of the RNA-dependent RNA polymerase (RdRp) gene was amplified and sequenced. The sequence analysis showed that the isolates shared nucleotide identities above 97.7% with the GenBank accession MG696855.1, corresponding to a CMV isolate obtained from lulo (Solanum quitoense) in Colombia. Phylogenetic analysis grouped the sequences generated in this study with sequences of reference to the subgroup IA. Our results contribute to the update and understanding of CMV population dynamics in this important plantain production region.

Keywords

CMV, ELISA, Molecular detection, Musa AAB

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